Marleen de Bruijne

Marleen de Bruijne

Professor

ORCID: 0000-0002-6328-902X

Publication year:
All
201 - 300 out of 337Page size: 100
  1. 2012
  2. Published

    Toward automatic regional analysis of pulmonary function using inspiration and expiration thoracic CT

    Murphy, K., Pluim, J. P. W., Rikxoort, E. M. V., Jong, P. A. D., Hoop, B. D., Gietema, H. A., Mets, O., de Bruijne, Marleen, Lo, P. C. P., Prokop, M. & Ginneken, B. V., 2012, In: Medical Physics. 39, 3, p. 1650-1662 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Towards exaggerated emphysema stereotypes

    Chen, C., Sørensen, L., Lauze, Francois Bernard, Igel, Christian, Loog, M., Feragen, A., de Bruijne, Marleen & Nielsen, Mads, 2012, Medical Imaging 2012: Computer-Aided Diagnosis. van Ginneken, B. & Novak, C. L. (eds.). SPIE - International Society for Optical Engineering, 13 p. 83150Q. (Proceedings of S P I E - International Society for Optical Engineering, Vol. 7964). (Progress in Biomedical Optics and Imaging; No. 31, Vol. 13).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  4. 2011
  5. Published

    2D-3D shape reconstruction of the distal femur from stereo X-Ray imaging using statistical shape models

    Baka, N., Kaptein, B. L., de Bruijne, Marleen, van Walsum, T., Giphart, J. E., Niessen, W. J. & Lelieveldt, B. P. F., 2011, In: Medical Image Analysis. 15, 6, p. 840-850 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    A bottom-up approach for labeling of human airway trees

    Lo, P., van Rikxoort, E. M., Goldin, J., Abtin, F., de Bruijne, Marleen & Brown, M., 2011, The Fourth International Workshop on Pulmonary Image Analysis . Beichel, R., de Bruijne, M., Kabus, S., Kiraly, A., Kuhnigk, J-M., McClelland, J., Mori, K., van Rikxoort, E. & Rit, S. (eds.). CreateSpace, p. 23-34 12 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  7. Published

    A computer-aided diagnosis system for the early and differential diagnosis of neurodegenerative disease

    Vrooman, H. A., Jasperse, M. M. S., Koek, M., Achterberg, F. V. D. L. A. H. C., de Bruijne, Marleen, Lugt, A. V. D. & Niessen, W. J., 2011, ECR Conference Proceedings 2011.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review

  8. Published

    A geometric framework for statistics on trees

    Feragen, A., Nielsen, Mads, Hauberg, S., Lo, P. C. P., de Bruijne, Marleen & Lauze, Francois Bernard, 2011, Department of Computer Science, University of Copenhagen. 47 p. (Koebenhavns Universitet. Datalogisk Institut. Rapport; No. 11/02).

    Research output: Book/Report › Report › Research

  9. Published

    An airway tree-shape model for geodesic airway branch labeling

    Feragen, A., Lo, P. C. P., Gorbunova, V., Nielsen, Mads, Dirksen, A., Reinhardt, J. M., Lauze, Francois Bernard & de Bruijne, Marleen, 2011, MFCA 2011: 3rd MICCAI Workshop on Mathematical Foundations of Computational Anatomy. Pennec, X., Joshi, S. & Nielsen, M. (eds.). p. 123-134 12 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  10. CT scores correlate with survival in cystic fibrosis patients awaiting lung transplantation

    Loeve, M., Hal, P. V., Robinson, P., Aitkin, M., de Bruijne, Marleen, Hop, W., Tiddens , H. A. W. M. & CT CFS Study Group, 2011, In: Journal of Cystic Fibrosis. 10, Supplement 1, p. S58 1 p., 227.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  11. Published

    Comparison of shape regression methods under landmark position uncertainty

    Baka, N., Metz, C., Schaap, M., Lelieveldt, B., Niessen, W. & de Bruijne, Marleen, 2011, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2011: 14th International Conference, Toronto, Canada, September 18-22, 2011, Proceedings, Part II. Fichtinger, G., Martel, A. & Peters, T. (eds.). Springer, Vol. Part II. p. 434-441 8 p. (Lecture notes in computer science, Vol. 6892).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  12. Published

    Decline in lung density is accelerated in active smokers

    Shaker, S. B., Dirksen, A., Lo, P. C. P., Skovgaard, Lene Theil, de Bruijne, Marleen & Pedersen, J. J. H., 2011. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  13. Published

    Dissimilarity-based classification of anatomical tree structures

    Sørensen, L., Lo, P. C. P., Dirksen, A., Petersen, Jens & de Bruijne, Marleen, 2011, Information Processing in Medical Imaging: 22nd International Conference, IPMI 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings. Székely, G. & Hahn, H. K. (eds.). Springer, p. 475-485 11 p. (Lecture notes in computer science, Vol. 6801).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  14. Published

    Distribution, size, and shape of abdominal aortic calcified deposits and their relationship to mortality in postmenopausal women

    Nielsen, Mads, Ganz, Melanie, de Bruijne, Marleen, Dam , E., Karsdal , M. & Christiansen , C., 2011. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  15. Published

    Estimating risk of future fracture or deformity of vertebrae of spine, by comparing processed data representing appearance of vertebra of spine with statistical model and deriving similarity between vertebra of spine and model

    Ghosh, A., Nielsen, Mads, Karsdal, M. A., Christiansen, C., de Bruijne, Marleen & Petterson, P., 2011, IPC No. G06T-007/00, Patent No. WO2009124995-A1, 15 Oct 2009, Priority date 10 Apr 2008, Priority No. GB006509

    Research output: Patent

  16. Published

    Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge

    Murphy, K., van Ginneken, B., Reinhardt, J., Kabus, S., Ding, K., Deng, X., Cao, K., Du, K., Christensen, G., Garcia, V., Vercauteren, T., Ayache, N., Commowick, O., Malandain, G., Glocker, B., Paragios, N., Navab, N., Gorbunova, V., Sporring, J., de Bruijne, M. & 34 others, Han, X., Heinrich, M., Schnabel, J., Jenkinson, M., Lorenz, C., Modat, M., McClelland, J., Ourselin, S., Muenzing, S., Viergever, M., De Nigris, D., Collins, D., Arbel, T., Peroni, M., Li, R., Sharp, G., Schmidt-Richberg, A., Ehrhardt, J., Werner, R., Smeets, D., Loeckx, D., Song, G., Tustison, N., Avants, B., Gee, J., Staring, M., Klein, S., Stoel, B., Urschler, M., Werlberger, M., Vandemeulebroucke, J., Rit, S., Sarrut, D. & Pluim, J., 2011, In: IEEE Transactions on Medical Imaging. 30, 11, p. 1901-1920 20 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Geometries on spaces of treelike shapes

    Feragen, A., Lauze, Francois Bernard, Lo, P. C. P., de Bruijne, Marleen & Nielsen, Mads, 2011, Computer Vision – ACCV 2010 : 10th Asian Conference on Computer Vision, Queenstown, New Zealand, November 8-12, 2010, Revised Selected Papers, Part II. Kimmel, R., Klette, R. & Sugimoto, A. (eds.). Springer, p. 160-173 14 p. (Lecture notes in computer science, Vol. 6493).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  18. Published

    Hippocampal shape predicts development of dementia in the general population

    Achterberg, H., de Bruijne, Marleen, Lijn, F. V. D., den Heijer , T., Vernooij , M., Ikram, M. A. & Niessen, W., 2011. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  19. Published

    Improved tissue segmentation by including an MR acquisition model

    Poot, D. H. J., de Bruijne, Marleen, Vernooij, M. W., Ikram, M. A. & Niessen, W. J., 2011, Multimodal Brain Image Analysis: First International Workshop, MBIA 2011, Held in Conjunction with MICCAI 2011, Toronto, Canada, September 18, 2011. Proceedings. Liu, T., Shen, D., Ibanez, L. & Tao, X. (eds.). Springer, p. 152-159 8 p. (Lecture notes in computer science, Vol. 7012).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  20. Published

    Longitudinal analysis of airways using registration

    Petersen, Jens, Gorbunova, V., Nielsen, Mads, Dirksen, A., Lo, P. C. P. & de Bruijne, Marleen, 2011, The Fourth International Workshop on Pulmonary Image Analysis. Beichel, R., de Bruijne, M., van Ginneken, B., Kabus, S., Kiraly, A., Kuhnigk, J-M., McClelland, J., Mori, K., van Rikxoort, E. & Rit, S. (eds.). CreateSpace Independent Publishing Platform , p. 11-22 12 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  21. Published

    Lung tissue classification in severe advanced cystic fibrosis from CT scans

    Ciompi, F., Palaioroutas, A., Loeve, M., Pujol, O., Radeva, P., Tiddens, H. & de Bruijne, Marleen, 2011, The Fourth International Workshop on Pulmonary Image Analysis. Beichel, R., de Bruine, M., van Ginneken, B., Kabus, S., Kiraly, A., Kuhnigk, J-M., McClelland, J., Mori, K., van Rikxoort, E. & Rit, S. (eds.). CreateSpace Independent Publishing Platform , p. 57-68 12 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  22. Published

    MRI tracheomalacia (TM) assessment in pediatric patients: feasibility study

    Ciet, P., Wielopolski, P., Lever, S., Manniesing, R., de Bruijne, Marleen, Lequin, M. H. & Tiddens, H. A. W. M., 2011.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  23. Published

    Maximum a posteriori estimation of linear shape variation with application to vertebra and cartilage modeling

    Crimi, A., Lillholm, Martin, Nielsen, Mads, Ghosh, A., de Bruijne, Marleen, Dam, E. B. & Sporring, Jon, 2011, In: IEEE Transactions on Medical Imaging. 30, 8, p. 1514-1526 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Method for computerized classification of e.g. computed tomography image, of lung of patient suffering from e.g. non-focal lung disease, involves combining probabilities within regions of interest to obtain quantitative fused probability

    Nielsen, Mads, de Bruijne, Marleen & Sørensen, L., 2011, IPC No. G06K-009/00, Patent No. US2011280457-A1, 17 Nov 2011, Priority date 11 May 2010, Priority No. US333513P

    Research output: Patent

  25. Published

    Multiple classifier systems in texton-based approach for the classification of CT images of Lung

    Gangeh, M. J., Sørensen, L., Shaker, S. B., Kamel, M. S. & de Bruijne, Marleen, 2011, Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging: International MICCAI Workshop, MCV 2010, Beijing, China, September 20, 2010, Revised Selected Papers. Menze, B., Langs, G., Tu, Z. & Criminsi, A. (eds.). Springer, p. 153-163 11 p. (Lecture notes in computer science, Vol. 6533).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  26. Published

    Optimal graph based segmentation using flow lines with application to airway wall segmentation

    Petersen, Jens, Nielsen, Mads, Lo, P. C. P., Saghir, Z., Dirksen, A. & de Bruijne, Marleen, 2011, Information Processing in Medical Imaging: 22nd International Conference, IPMI 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings. Székely, G. & Hahn, H. K. (eds.). Springer, p. 49-60 12 p. (Lecture notes in computer science, Vol. 6801).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  27. Published

    Plaque characterization in ex vivo MRI evaluated by dense 3D correspondence with histology

    van Engelen, A., de Bruijne, Marleen, Klein, S., Groen, H., Wentzel, J., van der Lugt, A. & Niessen, W., 2011.

    Research output: Contribution to conference › Conference abstract for conference › Research

  28. Published

    Plaque characterization in ex vivo MRI evaluated by dense 3D correspondence with histology

    van Engelen, A., de Bruijne, Marleen, Klein, S., Verhagen, H., Groen, H., Wentzel, J., van der Lugt, A. & Niessen, W., 2011, Medical Imaging 2011: computer-aided diagnosis. Summers, R. M. & van Ginneken, B. (eds.). SPIE - International Society for Optical Engineering, Vol. Part One. 11 p. 796329. (Progress in Biomedical Optics and Imaging; No. 32, Vol. 12).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  29. Published

    Prediction of dementia by hippocampal shape analysis

    Achterberg, H., van der Lijn, F., den Heijer, T., van der Lugt, A., Breteler, M., Niessen, W. & de Bruijne, Marleen, 2011.

    Research output: Contribution to conference › Conference abstract for conference › Research

  30. Published

    Reversibility of trapped air on CT scans of cystic fibrosis patients, an automated approach

    Loeve, M., de Bruijne, Marleen, Gorbunova, V., Hop, W. C. & Tiddens, H. A. W. M., 2011, In: Journal of Cystic Fibrosis. 10 , Supplement 1 , p. S51 1 p., 201.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  31. Published

    Robust shape regression for supervised vessel segmentation and its application to coronary segmentation in CTA

    Schaap, M., van Walsum, T., Neefjes, L., Metz, C., Capuano, E., de Bruijne, Marleen & Niessen, W., 2011, In: IEEE Transactions on Medical Imaging. 30, 11, p. 1974-1986 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Short-term effect of changes in smoking behaviour on emphysema quantification by CT

    Ashraf, H., Lo, P. C. P., Shaker, S. B., de Bruijne, Marleen, Dirksen, A., Tønnesen, P., Dahlbäck, M. & Pedersen, J. J. H., 2011, In: Thorax. 66, 1, p. 55-60

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Texture classification in pulmonary CT

    Sørensen, L., J. Gangeh, M., B. Shaker, S. & de Bruijne, Marleen, 2011, Lung imaging and computer-aided diagnosis. El-Baz, A. & Suri, J. S. . (eds.). CRC Press, p. 343–367 25 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  34. Published

    The Fourth International Workshop on Pulmonary Image Analysis

    Beichel, R. (ed.), de Bruijne, Marleen (ed.), van Ginneken, B. (ed.), Kabus, S. (ed.), Kiraly, A. (ed.), Kuhnigk, J. (ed.), McClelland, J. (ed.), Mori, K. (ed.), van Rikxoort, E. (ed.) & Rit, S. (ed.), 2011, CreateSpace Independent Publishing Platform . 270 p.

    Research output: Book/Report › Anthology › Research

  35. Published

    Vertebral fracture risk (VFR) score for fracture prediction in postmenopausal Women

    Lillholm, Martin, Ghosh, A., Pettersen, P. C., de Bruijne, Marleen, Dam, E. B., Karsdal, M. A., Christiansen, C., Genant, H. K. & Nielsen, Mads, 2011, In: Osteoporosis International. 22, 7, p. 2119-2128 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. 2010
  37. Published

    A texton-based approach for the classification of lung parenchyma in CT images

    Gangeh, M. J., Sørensen, L., Shaker, S. B., Kamel, M. S., de Bruijne, Marleen & Loog, M., 2010, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2010: 13th International Conference, Beijing, China, September 20-24, 2010, Proceedings, Part III. Jiang, T., Navab, N., Pluim, J. P. W. & Viergever, M. A. (eds.). Springer, Vol. Part III. p. 595-602 8 p. (Lecture notes in computer science; No. 6363).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  38. Published

    Conditional shape models for cardiac motion estimation

    Metz, C., Baka, N., Kirisli, H., Schaap, M., van Walsum, T., Klein, S., Neefjes, L., Mollet, N., Lelieveldt, B., de Bruijne, Marleen & Niessen, W., 2010, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2010: 13th International Conference, Beijing, China, September 20-24, 2010, Proceedings, Part I. Jiang, T., Navab, N., Pluim, J. P. W. & Viergever, M. A. (eds.). Springer, Vol. Part I. p. 452-459 8 p. (Lecture notes in computer science; No. 6361).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  39. Published

    Confidence of model based shape reconstruction from sparse data

    Baka, N., de Bruijne, Marleen, Reiber, J. H. C., Niessen, W. & Lelieveldt, B. P. F., 2010, 2010 IEEE International Symposium on Biomedical Imaging: from nano to macro. IEEE, p. 1077-1080 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  40. Published

    Correction of quantitative emphysema measures with density calibration based on measurements in the trachea

    Mol, C., Ginneken, B. V., de Bruijne, Marleen, Jong, P., Oudkerk, M., Dirksen, A. & Zanen, P., 2010.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  41. Published

    Dissimilarity-based multiple instance learning

    Sørensen, L., Loog, M., Tax, D. M. J., Lee, W., de Bruijne, Marleen & Duin, R. P. W., 2010, Structural, Syntactic, and Statistical Pattern Recognition: Joint IAPR International Workshop, SSPR&SPR 2010, Cesme, Izmir, Turkey, August 18-20, 2010. Proceedings. Hancock, E. R., Wilson, R. C., Windeatt, T., Ulusoy, I. & Escolano, F. (eds.). Springer, p. 129-138 10 p. (Lecture notes in computer science; No. 6218).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  42. Published

    Distribution, size, shape, growth potential and extent of abdominal aortic calcified deposits predict mortality in postmenopausal women

    Nielsen, Mads, Ganz, Melanie, Lauze, Francois Bernard, Pettersen, P. C., de Bruijne, Marleen, Clarkson, T. B., Dam, E. B., Christiansen, C. & Karsdal, M. A., 2010, In: BMC Cardiovascular Disorders. 10, 10 p., 56.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Early detection of emphysema progression

    Gorbunova, V., Jacobs, S. S. A. M., Lo, P. C. P., Dirksen, A., Nielsen, Mads, Bab-Hadiashar, A. & de Bruijne, Marleen, 2010, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2010: 13th International Conference, Beijing, China, September 20-24, 2010, Proceedings, Part II. Jiang, T., Navab, N., Pluim, J. P. W. & Viergever, M. A. (eds.). Springer, Vol. Part II. p. 193-200 8 p. (Lecture notes in computer science; No. 6362).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  44. Published

    Early diagnosis of dementia based on intersubject whole-brain dissimilarities

    Klein, S., Loog, M., Lijn, F. V. D., Heijer, T. D., Hammers, A., de Bruijne, Marleen, Lugt, A. V. D., Duin, R. P. W., Breteler, M. M. B. & Niessen, W. J., 2010, 2010 IEEE International Symposium on Biomedical Imaging: from nano to macro. IEEE, p. 249-252 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  45. Published

    Image dissimilarity-based quantification of lung disease from CT

    Sørensen, L., Loog, M., Lo, P. C. P., Ashraf, H., Dirksen, A., P. W. Duin, R. & de Bruijne, Marleen, 2010, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2010: 13th International Conference, Beijing, China, September 20-24, 2010, Proceedings, Part I. Jiang, T., Navab, N., Pluim, J. P. W. & Viergever, M. A. (eds.). Springer, Vol. Part I. p. 37-44 8 p. (Lecture notes in computer science; No. 6361).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  46. Published

    Lung CT registration combining intensity, curves and surfaces

    Gorbunova, V., Durrieman, S., Lo, P. C. P., Pennec, X. & de Bruijne, Marleen, 2010, Proceedings - 2010 7th IEEE International Symposium on Biomedical Imaging: from nano to macro. IEEE, p. 340-343 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  47. Published

    MACD - an imaging marker for cardiovascular disease

    Ganz, Melanie, de Bruijne, Marleen & Nielsen, Mads, 2010, Medical Imaging 2010: computer-aided diagnosis. Karssemeijer, N. & Summers, R. M. (eds.). SPIE - International Society for Optical Engineering, 9 p. 76240

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  48. Published

    Mass preserving image registration: results of Evaluation of Methods for Pulmonary Image Registration 2010 Challenge

    Gorbunova, V., Sporring, Jon, Lo, P. C. P., Dirksen, A. & de Bruijne, Marleen, 2010, Medical image analysis for the clinic: a grand challenge: workshop proceedings from the 13th International Conference on Medical Image Computing And Computer Assisted Intervention. van Ginneken, B., Murphy, K., Heimann, T., Pekar, V. & Deng, X. (eds.). CreateSpace Independent Publishing Platform , p. 155-164 10 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  49. Published

    Optimal CT-technique for the detection of emphysema progression

    Shaker, S. B., Lo, P. C. P., Wigstrom, L., de Bruijne, Marleen & Dirksen, A., 2010.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  50. Published

    Prediction of dementia by hippocampal shape analysis

    Achterberg, H. C., van der Lijn, F., den Heijer, T., van der Lugt, A., Breteler, M. M. B., Niessen, W. J. & de Bruijne, Marleen, 2010, Machine Learning in Medical Imaging: First International Workshop, MLMI 2010, Held in Conjunction with MICCAI 2010, Beijing, China, September 20, 2010. Proceedings. Wang, F., Yan, P., Suzuki, K. & Shen, D. (eds.). Springer, p. 42-49 8 p. (Lecture notes in computer science, Vol. 6357).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  51. Published

    Quantitative analysis of airway abnormalities in CT

    Petersen, Jens, Lo, P. C. P., Nielsen, Mads, Edula, G., Ashraf, H., Dirksen, A. & de Bruijne, Marleen, 2010, Medical Imaging 2010: computer-aided Diagnosis. Karssemeijer, N. & Summers, R. M. (eds.). SPIE - International Society for Optical Engineering, 12 p. 76241S. (Progress in Biomedical Optics and Imaging; No. 34, Vol. 11).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  52. Published

    Quantitative analysis of pulmonary emphysema using local binary patterns

    Sørensen, L. E. B. L., Shaker, S. B. & de Bruijne, Marleen, 2010, In: IEEE Transactions on Medical Imaging. 29, 2, p. 559-569 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    The Third International Workshop on Pulmonary Image Analysis

    Brown, M. (ed.), de Bruijne, Marleen (ed.), Ding, K. (ed.), van Ginneken, B. (ed.), Kiraly, A. (ed.), Kuhnigk, J. (ed.), McClelland, J. R. (ed.), Mori, K. (ed.) & Reinhardt, J. M. (ed.), 2010, CreateSpace Independent Publishing Platform . 170 p.

    Research output: Book/Report › Anthology › Research › peer-review

  54. Published

    Tracheomalacia assessment in pediatric patients with MRI: preliminary report

    Ciet, P., Wielopolski, P. A., Lever, S., de Bruijne, Marleen, Lequin, M. H. & Tiddens, H. A., 2010.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  55. Published

    Vessel tree extraction using locally optimal paths

    Lo, P. C. P., van Ginneken, B. & de Bruijne, Marleen, 2010, 2010 IEEE International Symposium on Biomedical Imaging: from nano to Macro. IEEE, p. 680-683

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  56. Published

    Vessel-guided airway tree segmentation: a voxel classification approach

    Lo, P. C. P., Sporring, Jon, Ashraf, H., Pedersen, J. J. H. & de Bruijne, Marleen, 2010, In: Medical Image Analysis. 14, 4, p. 527-538 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. 2009
  58. Published

    A longitudinal follow-up of COPD disease progression in a large cohort of smokers screened for early lung cancer: CBQ study

    Ashraf, H., Edula, G., de Bruijne, Marleen, Nielsen, Mads, Dahlbäck, A. D. M. & Pedersen, J. H., 2009, In: American Journal of Respiratory and Critical Care Medicine. p. A1492 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  59. Published

    Airway Tree Extraction with Locally Optimal Paths

    Lo, P. C. P., Sporring, Jon, Pedersen, J. J. H. & de Bruijne, Marleen, 2009, MICCAI 2009. p. 51-58 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  60. Published

    Bicycle Chain Shape Models

    Sommer, Stefan Horst, Tatu, A. J., Chen, C., Jørgensen, D., de Bruijne, Marleen, Loog, M., Nielsen, Mads & Lauze, Francois Bernard, 2009, Computer Vision and Pattern Recognition Workshops, 2009. CVPR Workshops 2009. IEEE Computer Society Conference on Computer Vision and Pattern Recognition.. IEEE, p. 157-163 7 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  61. Published

    Cerebellum segmentation in MRI using atlas registration and local multi-scale image descriptors

    van der Lijn, F., de Bruijne, Marleen, Hoogendam, Y. Y., Klein, S., Hameeteman, R., Breteler, M. & Niessen, W., 2009, IEEE International Symposium on Biomedical Imaging (ISBI'09): From Nano to Macro. p. 221-224 4 p. (Uden navn).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  62. Published

    Change in Smoking Habits Affects Lung Density by CT

    Ashraf, H., Lo, P., Shaker, S. B., de Bruijne, Marleen, Tønnesen, A. D. P., Dahlbäck, M. & Pedersen, J. H., 2009, American Thoracic Society International Conference. p. A5573 1 p. (American Journal of Respiratory and Critical Care Medicine; No. 1, Vol. 179).

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review

  63. Published

    Curve- and Surface-based Registration of Lung CT images via Currents

    Gorbunova, V., Durrleman, S., Lo, P., Pennec, X. & de Bruijne, Marleen, 2009, The Second International Workshop on Pulmonary Image Analysis. Brown, M., de Bruijne, M., van Ginneken, B., Kiraly, A., Kuhnigk, J-M., Lorenz, C., McClelland, J. R., Mori, K., Reeves, A. & Reinhardt, J. M. (eds.). CreateSpace, p. 15-25 11 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  64. Published

    Cystic Fibrosis: Are Volumetric Ultra-Low-Dose Expiratory CT Scans Sufficient for Monitoring Related Lung Disease?

    Loeve, M., Lequin, M. H., de Bruijne, Marleen, Hartmann, I. C., Gerbrands, K., Straten, M. V., Hop, W. J. & Tiddens, H. A. W. M., 2009, In: Radiology. 253, p. 223 229 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Discriminative Shape Alignment

    Loog, M. & de Bruijne, Marleen, 2009, Information Processing in Medical Imaging. Springer, Vol. 5636/2009. p. 459-466 7 p. (Lecture notes in computer science, Vol. 5636).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  66. Published

    Dissimilarity Representations in Lung Parenchyma Classification

    Sørensen, L. E. B. L. & de Bruijne, Marleen, 2009, Medical Imaging 2009: Computer-Aided Diagnosis. Karssemeijer, N. & Giger, M. L. (eds.). SPIE - International Society for Optical Engineering, 12 p. (Proceedings of SPIE; No. 7260).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  67. Published

    Extraction of Airways from CT (EXACT’09)

    Lo, P. C. P., van Ginneken, B., Reinhardt, J. M. & de Bruijne, Marleen, 2009, The Second International Workshop on Pulmonary Image Analysis. Brown, M., de Bruijne, M., van Ginneken, B., Kiraly, A., Kuhnigk, J-M., Lorenz, C., McClelland, J. R., Mori, K., Reeves, A. & Reinhardt, J. M. (eds.). CreateSpace, p. 175-189 15 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  68. Published

    Learning COPD Sensitive Filters in Pulmonary CT

    Sørensen, L. E. B. L., Lo, P. C. P., Ashraf, H., Sporring, Jon, Nielsen, Mads & de Bruijne, Marleen, 2009, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2009. 7 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  69. Published

    Mass Preserving Registration for lung CT

    Gorbunova, V., Lo, P. C. P., Loeve, M., Tiddens, H., Sporring, Jon, Nielsen, Mads & de Bruijne, Marleen, 2009, Proceedings of the SPIE: Medical Imaging 2009: Image Processing. Vol. 7259. 10 p. (Proceedings of the SPIE, Vol. 7259).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  70. Published

    Multiscale Vessel-guided Airway Tree Segmentation

    Lo, P. C. P., Sporring, Jon & de Bruijne, Marleen, 2009, Proceedings of Second International Workshop on Pulmonary Image Analysis. Brown, M., de Bruijne, M., van Ginneken, B., Kiraly, A., Kuhnigk, J-M., Lorenz, C., McClelland, J. R., Mori, K., Reeves, A. & Reinhardt, J. M. (eds.). CreateSpace, p. 323-332 10 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  71. Published

    Natural Progression of Lung Density Changes in COPD Measured by MSCT: Correlation to Lung Function

    Edula, G., Ashraf, H., Lo, P., de Bruijne, Marleen, Dahlbäck, M. & Pedersen, J. H., 2009, In: American Journal of Respiratory and Critical Care Medicine. 1, p. A6215 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  72. Published

    Obstructive pulmonary function: Patient classification using 3D registration of inspiration and expiration CT images

    Murphy, K., van Ginneken, B., van Rikxoort, E. M., de Hoop, B. J., Prokop, M., Lo, P., de Bruijne, Marleen & Pluim, J. P. W., 2009, Proceedings of the Second International Workshop on Pulmonary Image Analysis. Brown, M., de Bruijne, M., van Ginneken, B., Kiraly, A., Kuhnigk, J-M., Lorenz, C., Lorenz, C., McClelland, J. R., Mori, K., Reeves, A. & Reinhardt, J. M. (eds.). ClearSpace, p. 37-49 12 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  73. Published

    Preface

    Brown, M., de Bruijne, Marleen, Ginneken, B. V., Kuhnigk, A. K. A. J. M., Lorenz, C., McClelland, J. R., Mori, K., Reeves, A. P. & Reinhardt, J., 2009, Second International Workshop on Pulmonary Image Analysis: Proceedings of the Second International Workshop on Pulmonary Image Analysis. Create Space, p. 1

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  74. Published

    Prior knowledge regularization in statistical medical image tasks

    Crimi, A., Sporring, Jon, de Bruijne, Marleen, Lillholm, Martin & Nielsen, Mads, 2009, Proceedings of the MICCAI Workshop on Probabilistic Models for Medical Image Analysis. 12 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  75. Published

    The Second International Workshop on Pulmonary Image Analysis

    Brown, M. (ed.), de Bruijne, Marleen (ed.), van Ginneken, B. (ed.), Kiraly, A. (ed.), Kuhnigk, J. (ed.), Lorenz, C. (ed.), McClelland, J. R. (ed.), Mori, K. (ed.), Reeves, A. (ed.) & Reinhardt, J. M. (ed.), 2009, CreateSpace. 410 p.

    Research output: Book/Report › Anthology › Research › peer-review

  76. 2008
  77. Published

    A Computer-based Measure Using Normalized Heights Predicts Vertebral  Fracture Independent of BMD in Post-menopausal Women

    A. Ghosh, de Bruijne, Marleen, C. Pettersen, M. A. Karsdal, D. J. Leeming, C. Christiansen, P. & Nielsen, Mads, 2008, In: Journal of Bone and Mineral Research. suppl. S, p. S333 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  78. Published

    Air trapping in cystic fibrosis (CF) evaluated using ultra low dose computed tomography (CT): implications for sample size in clinical studies

    Loeve, M., Lequin, M. H., de Bruijne, Marleen, Hartmann, I. J., Hop, W. C. & Tiddens, H. A. W. M., 2008.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  79. Published

    Automated Quantification of the Morphological Atherosclerotic Calcification Distribution on X-Rays Is a Strong Predictor of Mortality in Postmenopausal Women

    Christiansen, C., Karsdal, M., Lauze, Francois Bernard, Dam, E., Ganz, Melanie, de Bruijne, Marleen, Sørensen, M., Barascuk, N. & Nielsen, Mads, 2008, In: Arteriosclerosis, Thrombosis, and Vascular Biology. 6, p. e48-e48 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  80. Published

    Can the distance from lung top to diaphragm on CT scans be used to estimate the lung inflation level for in- and expiratory  CT and MRI protocols?

    Loeve, M., Lequin, M., de Bruijne, Marleen, Hartmann, I., Hop, W. & Tiddens, H., 2008, In: Pediatric Radiology. suppl. 3, p. S574 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  81. Published

    Comparing inspiratory and expiratory computed tomography protocols for monitoring mild CF lung disease

    Loeve, M., Lequin, M. H., de Bruijne, Marleen, Hartmann, I. J., Hop, W. C. & Tiddens, H. A., 2008, 45th Annual Meeting of the European Society of Paediatric Radiology.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review

  82. Published

    Expiratory computed tomography (CT) protocols made during voluntary breath hold may be sufficient for monitoring cystic fibrosis (CF) lung disease

    Loeve, M., Lequin, M., de Bruijne, Marleen, Hartmann, I. J., Hop, W. C. & Tiddens, H. A., 2008.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  83. Published

    Integrating local voxel classification and global shape models for medical image segmentation

    van Rikxoort, E. M., de Bruijne, Marleen & van Ginneken, B., 2008, Medical Imaging 2008: Image Processing, Conference Proceedings. Reinhardt, J. M. & Pluim, J. P. W. (eds.). SPIE - International Society for Optical Engineering, p. Article 69144J 6 p. (Proceedings of SPIE; No. 6914).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  84. Published

    Measuring trapped air by computed tomography (CT) in CF: In search of the optimal protocol

    Loeve, M., Lequin, M., de Bruijne, Marleen, Hartmann, I., Hop, W. & Tiddens, H., 2008. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  85. Published

    Method of estimating risk of future fracture in vertebrae of spine used in medical field, involves computing different curvature values to obtain value representative of degree of irregularity of curvature of spine

    Pettersen, P., de Bruijne, Marleen, Christiansen, C. & Tanko, L. B., 2008, IPC No. G06F-019/00, Patent No. WO2008116918-A1, 2 Oct 2008

    Research output: Patent

  86. Published

    Monitoring of air trapping in a cohort of CF patients measured by computed tomography (CT) and pulmonary function tests

    Loeve, M., Lequin, M. H., de Bruijne, Marleen, Hartmann, I. J., Hop, W. C. & Tiddens, H. A., 2008.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  87. Published

    Multi-object tracking of human spermatozoa

    Sørensen, L. E. B. L., Østergaard, J., Johansen, P. & de Bruijne, Marleen, 2008, Medical Imaging 2008: Image Processing, Conference Proceedings. Reinhardt, J. M. & Pluim, J. P. W. (eds.). SPIE - International Society for Optical Engineering, p. 69142C 12 p. (Proceedings of SPIE; No. 6914).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  88. Published

    Pattern Recognition based Emphysema Quantification

    Sørensen, L. E. B. L. & de Bruijne, Marleen, 2008, Proceedings of the 16th Danish Conference on Pattern Recognition and Image Analysis. Olsen, S. I. (ed.). Department of Computer Science, University of Copenhagen, 2 p. (Department of Computer Science. University of Copenhagen. Technical Report; No. 08-10).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research

  89. Published

    Preface

    Brown, M., de Bruijne, Marleen, Ginneken, B. V., Kiraly, A., Kuhnigk, J. M., Lorenz, C., Mori, K. & Reinhardt, J., 2008, The First International Workshop on Pulmonary Image Analysis. Canada: Lulu.com, 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  90. Published

    Special Issue on Tribute Workshop for Peter Johansen

    Nielsen, Mads, de Bruijne, Marleen, Jørgensen, Camilla Holm, Olsen, Søren Ingvor, Steenstrup Pedersen, Kim & Sporring, Jon, 2008, In: Journal of Mathematical Imaging and Vision. 31, 2-3, p. 119-120

    Research output: Contribution to journal › Editorial › Research

  91. Published

    Spine Shape Predicts Vertebral Fractures in Postmenopausal Women

    de Bruijne, Marleen, Pettersen, P. C., A. Ghosh, M. G. Sorensen & Nielsen, Mads, 2008, In: Journal of Bone and Mineral Research. Supl. S, p. S37 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  92. Published

    Supervised shape analysis for risk assessment in osteoporosis

    de Bruijne, Marleen & Pettersen, P., 2008, Biomedical Imaging: From Nano to Macro, 2008 IEEE international Symposium on Biomedical Imaging. IEEE Communications Society, Vol. 1-4. p. 1581-1584 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  93. Submitted

    Supervised shape learning for fracture prediction

    de Bruijne, Marleen, Nielsen, Mads & Pettersen, P., 2008, (Submitted) 10 Apr 2008

    Research output: Patent

  94. Published

    Texture Based Emphysema Quantification in Lung CT

    Sørensen, L. E. B. L., Shaker, S. B. & de Bruijne, Marleen, 2008, The First International Workshop on Pulmonary Image Analysis: MICCAI 2008 Workshop Proceedings. Brown, M., de Bruijne, M., van Ginneken, B., Kiraly, A., Kuhnigk, J-M., Lorenz, C., Mori, K. & Reinhardt, J. (eds.). Lulu.com, p. 5-14 10 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  95. Published

    Texture Classification in Lung CT Using Local Binary Patterns

    Sørensen, L. E. B. L., Shaker, S. B. & de Bruijne, Marleen, 2008, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2008: 11th International Conference, New York, NY, USA, September 6-10, 2008, Proceedings, Part I. Metaxas, D., Axel, L., Fichtinger, G. & Szekely, G. (eds.). Springer, p. 934-941 8 p. (Lecture notes in computer science; No. 5241).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  96. Published

    The First International Workshop on Pulmonary Image Analysis

    Brown, M. (ed.), de Bruijne, Marleen (ed.), van Ginneken, B. (ed.), Kiraly, A. (ed.), Kuhnigk, J. (ed.), Lorenz, C. (ed.), Mori, K. (ed.) & Reinhardt, J. (ed.), 2008, Lulu.com. 316 p.

    Research output: Book/Report › Anthology › Research › peer-review

  97. Published

    Tribute Workshop for Peter Johansen

    Nielsen, Mads (ed.), de Bruijne, Marleen (ed.), Jørgensen, Camilla Holm (ed.), Olsen, Søren Ingvor (ed.), Steenstrup Pedersen, Kim (ed.) & Sporring, Jon (ed.), 2008, Berlin: Springer. 151 p. (Journal of Mathematical Imaging and Vision; No. 31(2-3)p.119-269).

    Research output: Book/Report › Anthology › Research

  98. Published

    Vertebral Fracture Prediction

    Pettersen, P., de Bruijne, Marleen, Christiansen, C. & Tanko, L. B., 2008, IPC No. G06F 19/00, Patent No. WO/2008/116918, 2 Oct 2008

    Research output: Patent

  99. Published

    Vessel-guided airway segmentation based on voxel classification

    Lo, P. C. P., Sporring, Jon, Ashraf, H., Holst Pedersen, J. J. & de Bruijne, Marleen, 2008, The first International Workshop on Pulmonary Image Analysis: New York, September 6, 2008. Brown, M., de Bruijne, M., van Ginneken, B., Kiraly, A., Kuhnigk, J-M., Lorenz, C., Mori, K. & Reinhardt, J. (eds.). Lulu.com, p. 113-122

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  100. Published

    Volumetric ultra low dose expiratory computed tomography scans could be sufficient to monitor CF lung disease

    Loeve, M., Lequin, M. H., de Bruijne, Marleen, Hartmann, I., Hop, W. C. & Tiddens, H. A., 2008, In: Journal of Cystic Fibrosis. S2, p. S59 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  101. Published

    Voxel Classification Based Vessel-guided Airway Segmentation

    Lo, P. C. P., Sporring, Jon, Ashraf, H., Pedersen, J. H. J. & de Bruijne, Marleen, 2008, Proceedings of the Danish Conference on Pattern Recognition and Image Analysis: Organised by Danish Society for Automatic Pattern Recognition (Dansk Selskab for automatisk genkendelse af mønstre), Departmen of Computer Science, University of Copenhagen, Thursday 21 August 2008. Olsen, S. I. (ed.). Museum Tusculanum, p. 8-9 (Datalogisk Institut. Københavns Universitet. Technical Reports; No. 08-10).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research

  102. Published

    Voxel classification based airway tree segmentation

    Lo, P. C. P. & de Bruijne, Marleen, 2008, Medical Imaging 2008: Image Processing, San Diego, Calif., USA, February 17, 2008, Conference proceedings. Reinhardt, J. M. & Pluim, J. P. W. (eds.). SPIE - International Society for Optical Engineering, p. Article 69141K (Proceedings of the SPIE; No. 6914).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  103. Published

    Weight preserving image registration for monitoring disease progression in lung CT.

    Gorbunova, V., Lo, P. C. P., Haseem, A., Dirksen, A., Nielsen, Mads & de Bruijne, Marleen, 2008, Mecical Image Computing and Computer-Assisted Intervention - MICCAI 2008: 11th International Conference, New York, NY, USA, September 6-10, 2008, proceedings, Part II. Metaxas, D., Axel, L., Fichtinger, G. & Szekely, G. (eds.). Springer, p. 863-871 8 p. (Lecture notes in computer science; No. 5242).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  104. 2007
  105. Published

    A Computer-based Measure of Irregularity in Vertebral Alignment is a BMD-independent Predictor of Fracture Risk in Postmenopausal Women

    Pettersen, P., de Bruijne, Marleen, Chen, J., He, Q., Christiansen, C. & Tankó, L. B., 2007, In: Osteoporosis International. 18, 11, p. 1525-1530

    Research output: Contribution to journal › Journal article › Research › peer-review

  106. Published

    A Family of Principal Component Analyses for Dealing with Outliers

    Iglesias, J. E., de Bruijne, Marleen, Loog, M., Lauze, F. B. & Nielsen, Mads, 2007, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007: 10th International Conference, Brisbane, Australia, October 29- November 2, 2007, Proceedings, Part II. Ayache, N., Ourselin, S. & Maeder, A. (eds.). Springer, p. 178-185 (Lecture notes in computer science; No. 4792).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

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